BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB004G10LP1|AL425286
(1021 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1474 1255 0.0
>3x_Contig1474
Length = 10584
Score = 1255 bits (626), Expect = 0.0
Identities = 841/887 (94%), Gaps = 28/887 (3%)
Strand = Plus / Minus
Query: 135 ctaccgaggttgttgctactccaccagcttgtycattggcatgtgtkgctcaagtcaaca 194
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 1378 ctaccgaggttgttgctactccaccagcttgtttattggcatgtgttgctcaagtcaaca 1319
Query: 195 agaaatctgactgcgatggcatgcgaagacattgcttgtatgtgtaagtcagacggttct 254
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1318 agaaatctgactgcgatggcatgc-aagacattgcttgtatgtgtaagtcagacggttct 1260
Query: 255 gatttgacctckkgtttgaagtgckatctgtccagasggtgaggcgtgatgctgctcaga 314
||||||||||| ||||||||| | ||||||||||| |||||||| |||||||||||| |
Sbjct: 1259 gatttgacctcttgtttgaagt-ctatctgtccagacggtgaggc-tgatgctgctca-a 1203
Query: 315 gacgcattggratckacctgtmag-ctcgaaggtgttacattggatgatgatgtgacctc 373
|||||||||| ||| |||||| || ||| |||||||||||||||||||||||||||||||
Sbjct: 1202 gacgcattggaatctacctgtaaggctc-aaggtgttacattggatgatgatgtgacctc 1144
Query: 374 atcctcttcatcctcctcctcctcttcatcctcatcctcatcctgcatcctcagtgcctc 433
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 1143 atcctcttcatcctcctcctcctcttcatcctcatcctcatcct-catcctcat--cctc 1087
Query: 434 atcttcttgccagctccagtcgatcttcaacatctgtcagtcgttcctcgtactccatct 493
|||||||| ||| ||||| || ||||||||||||| ||| || |||||| ||||||||||
Sbjct: 1086 atcttctt-cca-ctcca-tc-atcttcaacatct-tca-tc-ttcctc-tactccatct 1035
Query: 494 agttcatctkcctcttcttcatccacctctgaggaaccaactacttcttctgctgaacca 553
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 agttcatcttcctcttcttcatccacctctgaggaaccaactacttcttctgctgaacca 975
Query: 554 tcttcttckgccgaaccatcttcttctgctgaagccatgcttcttctgctgaaccgagcc 613
|||||||| |||||||||||||||||||||||| |||| |||||||||||||||| | ||
Sbjct: 974 tcttcttctgccgaaccatcttcttctgctgaa-ccat-cttcttctgctgaacc-atcc 918
Query: 614 acttcgtgaagagcgcagtccgacktccgaagaaccaacctcgtccgcagaaccaacaac 673
||||| |||||||| || ||| || |||||||||||||||||||||||||||||||||||
Sbjct: 917 acttc-tgaagagc-ca-tcc-acttccgaagaaccaacctcgtccgcagaaccaacaac 862
Query: 674 ttcaagttcaaattgtgtctgaaaccactgctgccccaacttctaccttggcaacctcaa 733
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ttcaagttcaa-ttgtgtctgaaaccactgctgccccaacttctaccttggcaacctcaa 803
Query: 734 cttccgcagaaccaactagcactccaaccaccattgccactatctcctccgatggtgcta 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 cttccgcagaaccaactagcactccaaccaccattgccactatctcctccgatggtgcta 743
Query: 794 atgctttgtcgttaggaaacgctgttttcggtggtttggctgtagcaggtctattgttgt 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 atgctttgtcgttaggaaacgctgttttcggtggtttggctgtagcaggtctattgttgt 683
Query: 854 gaactagcaacctttgcaaatcaattaattctagttacaaattactataacaaaatctaa 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gaactagcaacctttgcaaatcaattaattctagttacaaattactataacaaaatctaa 623
Query: 914 acagaaaagtggscatagtattgtctgacaaagaaatccaatacgktcatacgttctttt 973
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 622 acagaaaagtggccatagtattgtctgacaaagaaatccaatacgttcatacgttctttt 563
Query: 974 aatggaca-cagttcgga-cawttcacactga-ttttctattcaaaa 1017
|||||||| ||||||||| || |||||||||| ||||||||||||||
Sbjct: 562 aatggacaccagttcggaccatttcacactgatttttctattcaaaa 516
Score = 170 bits (85), Expect = 4e-42
Identities = 107/113 (94%), Gaps = 2/113 (1%)
Strand = Plus / Minus
Query: 1 ttgtttcatcgtgaaagaggattgttttagtccaktcaagaccaaggttatactaccaac 60
||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 1504 ttgtttcatagtgaaagaggattgttttagtccattcaagaccaaggttatactatcaac 1445
Query: 61 gkgaactgtccatgtcgttatgcgtttctctactgctctaggtgctgcttttt 113
||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 1444 -tgaactgtccat-tcgttatgcgtttctctactgctctaggtgctgcttttt 1394
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6706
Number of Sequences: 1807
Number of extensions: 6706
Number of successful extensions: 183
Number of sequences better than 1.0e-20: 1
length of query: 1021
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1005
effective length of database: 10,329,639
effective search space: 10381287195
effective search space used: 10381287195
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)